HBP Technology Catalogue

 

The HBP Technology Catalogue includes the range of HBP developing technologies - hardware, services, models, datasets and/or software solutions - that have potential for commercial and/or non-commercial exploitation. Some of these tools and services are already available at EBRAINS, the digital research platform developed by HBP. They present different grades of maturity, which has been assessed using the TRL scale.

The Catalogue provides a link to a complementary technology sheet where further technical and market-oriented details are provided.

Explore the brain

  • Explore & analyze human brain data in 3D from a web browser:  Interactive Human Brain Atlas
  • Cytoarchitecture linked to gene expression using probabilistic brain maps: JuGEx
  • A solution for the analysis of high-dimensional neural activity data: Elephant
  • Package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats: Neo  
  • A new microscopy paradigm for quantitative analysis of 3D samples: DeepScope
  • A universal solution for real-time, image-based autofocus in microscopy: RAPID
  • Generation of unique nanobodies for brain studies:  Nanobody platform
  • Molecular tool for studying memory on a single-synapse resolution:  SynActive
  • High throughput Light Sheet Fluorescence Microscope:  di2CLSFM
  • Advanced clearing technique for human brain:  SWITCH/TDE clearing
  • Quantify and localize features in histological rodent brain section images:  QUINT workflow
  • Pre- and post- processing toolbox for histological rodent brain section images: Nutil
  • Rapid and efficient rodent brain image registration to a volumetric reference atlas:  QuickNII and VisuAlign

Access to Brain Atlases

Brain simulation

  • Virtual Epileptic Patient, a new method  for improving the treatment of drug-resistant epilepsy: VEP
  • Method for creating patient-specific brain models for in-silico clinical hypothesis testing:  Personalized in-silico Brain Networks
  • Virtual Mouse Brain, a Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics: VMB
  • Software for simulating macromolecular diffusion: SDA
  • Spiking neural network simulator: NEST
  • Web-based educational tool for NEST simulator: NEST Desktop

Access to the Brain Simulation Platform

Silicon brains

  • A pioneering brain inspired neuromorphic computing platform: SpiNNaker
  • Emulation of networks of spiking point neurons and plastic synapses: BrainScaleS

Access to SpiNNaker and BrainScaleS

Medicine

  • Medical Informatics Platform, a privacy preserving data analytics software for clinicians & researchers: MIP
  • Virtual Epileptic Patient, a new method  for improving the treatment of drug-resistant epilepsy: VEP
  • Method for creating patient-specific brain models for in-silico clinical hypothesis testing:  Personalized in-silico Brain Networks

Access to The Virtual Brain

Robotics

  • Online platform with software tools and model libraries to collaboratively design and run virtual experiments where brain models are connected to bodies in complex dynamic environments: Neurorobotics Platform
  • Neuroscience-based design for advanced control capabilities in robots:  Compliant Neurorobotics
  • Program and remotely connect to robots with total ease: Animus

Access to the Neurorobotics Platform

Massive computing

  • Secure integration of compute and data resources: UNICORE
  • Dynamic Load Balancing Library, a library to improve the performance of HPC applications: DLB
  • The multidimensional Big Data analytics platform, built around data: Qbeast

High Performance Analytics & Computing Platform